2026 Frontier Symposium in Computational and Experimental Biophysics and Bioscience
Yuji Sugita (RIKEN R-CCS), Chen Song (Peking University), Wonpil Im (Lehigh University), Chang Yun Son (Seoul National University), Jaewoon Jung (RIKEN R-CCS), Chigusa Kobayashi (RIKEN R-CCS), Ai Shinobu (The University of Osaka), Eiji Yamamoto (Keio University), Yongchan Lee (Yokohama City University), Takahiro Kosugi (Kanazawa University)
Understanding the essence of life requires an integrated approach that spans the vast spatiotemporal scales from atoms and molecules to entire cells. This workshop aims to establish the foundational methodology for “AI-driven multiscale simulation” that harnesses recent advances in AI technology to bridge simulations across different hierarchical levels. Through this workshop, we seek to create a new research paradigm for achieving a truly integrated understanding of life phenomena from molecules to cells, establishing “AI-driven Multiscale Life Science”.
Understanding the relationship between function and structure of biomolecules such as proteins and nucleic acids requires not only simulations by molecular dynamics, but also a deep understanding of various physical chemical theories such as solution theory and molecular vibrational theory, as well as information science such as machine learning and Bayesian statistics. In this workshop, experts in these fields are invited to give lectures to discuss state-of-the-art techniques/results and to understand their interrelationships. In addition, experts are invited from one of the Programs for Promoting Research on the Supercomputer “Fugaku” to discuss the cutting-edge computational science research.
Understanding the relationship between function and structure of biomolecules such as proteins and nucleic acids requires not only simulations by molecular dynamics, but also a deep understanding of various physical chemical theories such as solution theory and molecular vibrational theory, as well as information science such as machine learning and Bayesian statistics. In this workshop, experts in these fields are invited to give lectures to discuss state-of-the-art techniques/results and to understand their interrelationships. In addition, experts are invited from one of the Programs for Promoting Research on the Supercomputer “Fugaku” to discuss the cutting-edge computational science research.
Computational approaches are becoming increasingly important in biophysics, not only for simulations but also for the detailed interpretation of various measurement data. In particular, with the recent launch of modern supercomputers such as Fugaku, enormous computational resources have become available, and new computational methods and applications that were not computationally feasible in the past are becoming possible. In this symposium, we invite researchers who conduct cutting-edge high-performance computations. We discuss current computational research using supercomputers as well as future directions of computational biophysics.
シンポジウム(第60回日本生物物理学会年会)2022年9月28日(月) 13:50~16:20
細胞内メゾ複雑体の構造と機能
杉田 有治(理化学研究所), 山本 林(東京大学)
Proteins often assemble to form “mesoscopic” complexes – some ordered and some disordered – to exert their functions
in the cell. Therefore, elucidating their architectures and physical properties is necessary to understand the molecular mechanisms underlying life phenomena and diseases. In this research area “Cross-Scale Biology”, we particularly focus
on mesoscopic structures in the range of 20–500 nm (including LLPS condensates), which we define as “meso-entangled bodies (MEBs)”, because MEBs are thought to be key factors that determine the fate of organisms through the transition from disordered to ordered states at the mesoscale. In this symposium, researchers working on the MEBs will gather to discuss the latest technologies and findings, including In-cell AFM, cryo-EM, chemical biology and LLPS.
Machine learning approaches such as AlphaFold are imparting significant impacts on various scientific fields. Molecular simulations are no exception. In this workshop, we will argue “what is and will be true progress that cannot be achieved without machine learning approaches” and “how AlphaFold will impact the future of molecular simulations.